BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D09SP1|AL425120
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1266 1870 0.0
>3x_Contig1266
Length = 8887
Score = 1870 bits (940), Expect = 0.0
Identities = 955/962 (99%), Gaps = 1/962 (0%)
Strand = Plus / Minus
Query: 1 atccagcggagattttacatccataatcggggacaaactagtcgctgatctgccaaactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8271 atccagcggagattttacatccataatcggggacaaactagtcgctgatctgccaaactg 8212
Query: 61 aggctgtagactaggtaactttgtgctctggatagaagatgatggaattgaaggttttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8211 aggctgtagactaggtaactttgtgctctggatagaagatgatggaattgaaggttttgg 8152
Query: 121 aaaaaccatctcactttgtgatctttgtaatgttacagtcgctttattccgaggaggacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8151 aaaaaccatctcactttgtgatctttgtaatgttacagtcgctttattccgaggaggacg 8092
Query: 181 accccgcctttttggtgcagaaccaggttgctgctgctgctgttgagatacaggctgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8091 accccgcctttttggtgcagaaccaggttgctgctgctgctgttgagatacaggctgctg 8032
Query: 241 ctgttgggagctcgctttttcggatacctttccagaaggtacagatgcgctttttgtagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8031 ctgttgggagctcgctttttcggatacctttccagaaggtacagatgcgctttttgtagc 7972
Query: 301 cttttttctggtagagtcacttctggaagcatggtgatgtttaggagcctgaggcggcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7971 cttttttctggtagagtcacttctggaagcatggtgatgtttaggagcctgaggcggcga 7912
Query: 361 as-agagccttcttgttgtgtaaagtcaaataaaggtttaagctcatctaatacttcgaa 419
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7911 agcagagccttcttgttgtgtaaagtcaaataaaggtttaagctcatctaatacttcgaa 7852
Query: 420 cttctcagccaacttcgaggctagctctaagggaatccacgtaccttggtttttaccgaa 479
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 7851 cttctcagccaacttcgaggctagctctaagggaatccacgtaccttggtatttaccgaa 7792
Query: 480 accaccttgaaccttttcgtgggtatctgttatgacttctttttccaatatccttgtcct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7791 accaccttgaaccttttcgtgggtatctgttatgacttctttttccaatatccttgtcct 7732
Query: 540 tttagcctttggaaactttgcagccttcaatatatgagtggcattcacccaattatctgc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7731 tttagcctttggaaactttgcagccttcaatatatgagtggcattcacccaattatctgc 7672
Query: 600 ctttctcttcattattgacccagtcgggtgtataaactcatagacatccacgccagagta 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7671 ctttctcttcattattgacccagtcgggtgtataaactcatagacatccacgccagagta 7612
Query: 660 cttcgcagaatatatttgattggatgacatggtattaactttatccttgtaaaaaaattg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7611 cttcgcagaatatatttgattggatgacatggtattaactttatccttgtaaaaaaattg 7552
Query: 720 atgcaatatcttgcacccgtgctatgtgtaagatcaaatttggttccaaaaatcgatatg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7551 atgcaatatcttgcacccgtgctatgtgtaagatcaaatttggttccaaaaatcgatatg 7492
Query: 780 atatatcttagtccccaattcagtttgacagtatgctggtcttcgactgactataccccc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7491 atatatcttagtccccaattcagtttgacagtatgctggtcttcgactgactataccccc 7432
Query: 840 gaaatatagmgactggtaatggcgggtatgtmcagtaaatgtcagcaaactcgaaaaama 899
||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 7431 gaaatatagcgactggtaatggcgggtatgtccagtaaatgtcagcaaactcgaaaaaaa 7372
Query: 900 ctcaatgaatttccaatcaaaccttgtatggrtattcaaggtgtgaagatcgtctttctc 959
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7371 ctcaatgaatttccaatcaaaccttgtatggatattcaaggtgtgaagatcgtctttctc 7312
Query: 960 tt 961
||
Sbjct: 7311 tt 7310
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7165
Number of Sequences: 1807
Number of extensions: 7165
Number of successful extensions: 127
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)